PXD016225 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Trichodesmium field metaproteomes |
Description | This project presents field metaproteomics data from Trichodesmium colonies collected from the surface ocean. Most were collected from the tropical and subtropical Atlantic ocean, but there is also data from the long term Bermuda Atlantic Time Series and Hawaii Ocean Time Series. Trichodesmium is a globally important marine microbe and its growth and nitrogen fixation activity is limited by nutrient availability in the surface ocean. This dataset was generated to answer questions about limitations on Trichodesmium's growth and activity in the nature. |
HostingRepository | PRIDE |
AnnounceDate | 2020-05-08 |
AnnouncementXML | Submission_2020-05-07_22:39:50.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD016225 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Noelle Held |
SpeciesList | scientific name: Trichodesmium; NCBI TaxID: 1205; |
ModificationList | Oxidation; Acetyl; Carbamidomethyl |
Instrument | Orbitrap Fusion |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2019-11-11 03:41:07 | ID requested | |
⏵ 1 | 2020-05-07 22:39:51 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Trichodesmium, ocean, marine microbe, nitrogen fixation, diazotroph |
Contact List
Makoto Saito |
contact affiliation | Department of Marine Chemistry and Geochemistry, Woods Hole Oceanographic Institution |
contact email | msaito@whoi.edu |
lab head | |
Noelle Held |
contact affiliation | Woods Hole Oceanographic Institution |
contact email | noelleheld@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2020/05/PXD016225 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD016225
- Label: PRIDE project
- Name: Trichodesmium field metaproteomes