PXD007541

PXD007541 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Characterization of indole-3-acetic acid biosynthesis and the effects of IAA exposure on the proteome of the plant-associated microbe Pantoea sp. YR343
Description	Pantoea sp. YR343, isolated from the Populus deltoides rhizosphere, is a robust plant root colonizer that produces indole-3-acetic acid (IAA). Genomic and metabolomic analyses predicted that Pantoea sp. YR343 synthesizes IAA primarily using the indole-3-pyruvate pathway. Pantoea sp. YR343 proteomes showed upregulation of IpdC for growth in the presence of tryptophan or IAA versus controls.
HostingRepository	MassIVE
AnnounceDate	2018-02-20
AnnouncementXML	Submission_2018-02-20_07:52:23.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Greg Hurst
SpeciesList	scientific name: Pantoea sp. YR343; NCBI TaxID: 1144341;
ModificationList	S-carboxamidomethyl-L-cysteine
Instrument	LTQ XL

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2017-08-23 15:26:40	ID requested
⏵ 1	2018-02-20 07:52:24	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Pantoea, tryptophan, indole-3-acetic acid, plant-microbe interaction, rhizosphere

submitter keyword: Pantoea, tryptophan, indole-3-acetic acid, plant-microbe interaction, rhizosphere

Contact List

Jennifer L. Morrell-Falvey
contact affiliation	Oak Ridge National Laboratory
contact email	morrelljl1@ornl.gov
lab head
Greg Hurst
contact affiliation	Oak Ridge National Laboratory
contact email	hurstgb@ornl.gov
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081478