PXD007197
PXD007197 is an original dataset announced via ProteomeXchange.
Dataset Summary
Title | Comparison of genomes and proteomes of whole genome-sequenced Campylobacter jejuni from different phylogenetic backgrounds |
Description | We performed whole genome sequencing on four isolates of C. jejuni, two of which were closely related phylogenetically while the remaining two were phylogenetically divergent. Genomes were closed and finished. 4-plex iTRAQ experiments were performed on the four isolates after growth on solid medium for a standard time. The research questions were: 1) how closely do the protein profiles match among the four isolates, and 2) were there any results consistent with differences in regulation among isolates. |
HostingRepository | MassIVE |
AnnounceDate | 2017-11-15 |
AnnouncementXML | Submission_2017-11-15_08:15:01.xml |
DigitalObjectIdentifier | |
ReviewLevel | Non peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Clifford Clark |
SpeciesList | scientific name: Campylobacter jejuni; NCBI TaxID: 197; |
ModificationList | Carbamidomethyl; iTRAQ4plex114; iTRAQ4plex115; iTRAQ4plex |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
---|---|---|---|
0 | 2017-08-04 09:00:06 | ID requested | |
⏵ 1 | 2017-11-15 08:15:02 | announced |
Publication List
no publication |
Keyword List
submitter keyword: Campylobacter jejuni, comparative proteomics, comparative genomics |
Contact List
Clifford G. Clark | |
---|---|
contact affiliation | National Microbiology Laboratory, Public Health Agency of Canada |
contact email | clifford.clark@phac-aspc.gc.ca |
lab head | |
Clifford Clark | |
contact affiliation | National Microbiology Laboratory, Public Health Agency of Canada |
contact email | clifford.clark@phac-aspc.gc.ca |
dataset submitter |
Full Dataset Link List
MassIVE dataset URI |
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/MSV000081410 |