PXD002370

PXD002370 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	UPS1-yeast standard analysis - Technical Brief Calibration Plot for Proteomics (CP4P): A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments
Description	Label-free quantification of various concentrations of Universal Proteomic Standard (UPS1, Sigma-Aldrich) spiked in yeast extract.
HostingRepository	PRIDE
AnnounceDate	2024-10-22
AnnouncementXML	Submission_2024-10-22_04:11:11.063.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yohann Couté
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606; scientific name: Saccharomyces cerevisiae (Baker's yeast); NCBI TaxID: 4932;
ModificationList	iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2015-06-15 01:37:44	ID requested
1	2015-11-19 02:31:19	announced
2	2015-12-15 07:46:32	announced	Updated publication details.
⏵ 3	2024-10-22 04:11:19	announced	2024-10-22: Updated project metadata.

Publication List

Giai Gianetto Q, Combes F, Ramus C, Bruley C, Cout, é Y, Burger T, Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments. Proteomics, 16(1):29-32(2016) [pubmed]
10.1002/pmic.201500189;

Giai Gianetto Q, Combes F, Ramus C, Bruley C, Cout, é Y, Burger T, Calibration plot for proteomics: A graphical tool to visually check the assumptions underlying FDR control in quantitative experiments. Proteomics, 16(1):29-32(2016) [pubmed]

10.1002/pmic.201500189;

Keyword List

curator keyword: Technical
submitter keyword: proteomic standard, label-free, nanoLC-MS/MS

curator keyword: Technical

submitter keyword: proteomic standard, label-free, nanoLC-MS/MS

Contact List

Christophe Bruley
contact affiliation	EDyP
contact email	christophe.bruley@cea.fr
lab head
Yohann Couté
contact affiliation	EDyP
contact email	yohann.coute@cea.fr
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/11/PXD002370
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2015/11/PXD002370

PRIDE project URI

Repository Record List

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