PXD000764 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Discovery of new cerebrospinal fluid biomarkers for meningitis in children C4PR_LIV |
Description | Bacterial meningitis is usually fatal without treatment and prompt and accurate diagnosis coupled with the timely administration of parenteral antibiotics, are necessary in order to save lives. The diagnosis can sometimes be delayed whilst samples are analysed in a laboratory using traditional methods of microscopy and antigen testing. The objective of our project is to define specific protein signatures in cerebrospinal fluid associated with Streptococcus pneumoniae infection which could lead to the development of assays or point-of-care devices to improve the speed and accuracy of diagnosis, and guide the clinicians in the treatment and prognosis of children with bacterial meningitis. The associated research paper is in preparation. |
HostingRepository | PRIDE |
AnnounceDate | 2017-10-24 |
AnnouncementXML | Submission_2017-10-24_00:10:19.xml |
DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD000764 |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Supported dataset by repository |
PrimarySubmitter | Da Qi |
SpeciesList | scientific name: Streptococcus pneumoniae (strain ATCC BAA-255 / R6); NCBI TaxID: 171101; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | Oxidation; Carbamidomethyl |
Instrument | LTQ Orbitrap Velos |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2014-02-18 02:11:39 | ID requested | |
1 | 2014-07-22 06:56:12 | announced | |
2 | 2014-07-25 01:53:32 | announced | Updated publication reference for PubMed record(s): 25047258. |
3 | 2017-02-16 00:30:23 | announced | Updated project metadata. |
⏵ 4 | 2017-10-24 00:10:20 | announced | Updated project metadata. |
Publication List
Ternent T, Csordas A, Qi D, G, ó, mez-Baena G, Beynon RJ, Jones AR, Hermjakob H, Vizca, í, no JA, How to submit MS proteomics data to ProteomeXchange via the PRIDE database. Proteomics, 14(20):2233-41(2014) [pubmed] |
Keyword List
curator keyword: Biomedical |
submitter keyword: Meningitis, cerebrospinal fluid, Biomarkers, Streptococcus pneumoniae |
Contact List
Rob Beynon |
contact affiliation | Institute of Integrative Biology, University of Liverpool |
contact email | R.Beynon@liverpool.ac.uk |
lab head | |
Da Qi |
contact affiliation | University of Liverpool |
contact email | ddq@liv.ac.uk |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2014/07/PXD000764 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD000764
- Label: PRIDE project
- Name: Discovery of new cerebrospinal fluid biomarkers for meningitis in children C4PR_LIV