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RPXD034744

RPXD034744 is container for one or more analyses. The general container metadata is provided below and the table under Dataset History provides links to the various reanalyses have been provided (if any) in this container.

Reanalysis Container Summary

Title	JPST000144-1 Phosphoproteomics analysis of TCR signaling [Reanalysis: JPST000144]
Description	We investigated the global dynamic view of TCR-dependent phosphorylation in thymocytes stimulated with antibodies to CD3e. Thymocytes prepared from C57BL/6 mice at 4 to 8 weeks of age were subjected to phosphor-iTRAQ system, which is combined Fe-IMAC and iTRAQ. Phorphoproteomics analysis identified and quantified 8945 unique phosphopeptides (2634 proteins). [Original project description]
HostingRepository	jPOST
AnnounceDate	2023-04-01
AnnouncementXML	Submission_2023-04-01_00:55:29.941.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/RPXD034744
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Reanalysis of JPST000144
RepositorySupport	Supported dataset by repository
PrimarySubmitter	jPOST reanalysis
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	S-carboxamidomethyl-L-cysteine; iTRAQ4plex reporter+balance reagent N-acylated residue; iTRAQ4plex reporter+balance reagent acylated N-terminal; O-phospho-L-serine; O-phospho-L-threonine; O4'-phospho-L-tyrosine; 2-pyrrolidone-5-carboxylic acid (Gln); 2-pyrrolidone-5-carboxylic acid (Glu); iTRAQ4plex reporter+balance reagent O-acylated residue
Instrument	QSTAR Elite

Dataset History

Reanalysis	Revision	Datetime	Status	Title / ChangeLog Entry
	0	2022-06-20 17:57:12	ID requested
0	1	2023-04-01 00:55:30	announced	JPST000144-1 Phosphoproteomics analysis of TCR signaling [Reanalysis: JPST000144]

Publication List

no publication

no publication

Keyword List

submitter keyword: reanalysis, Mouse, iTRAQ, Phosphoproteome

submitter keyword: reanalysis, Mouse, iTRAQ, Phosphoproteome

Contact List

Yasushi Ishihama
lab head
jPOST reanalysis
contact affiliation	jPOST
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001747/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST001747/