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RPXD000665

DataSet Summary

  • HostingRepository: PeptideAtlas
  • AnnounceDate: 2013-12-20
  • AnnouncementXML: Submission_2013-12-20_11:37:00.xml
  • DigitalObjectIdentifier:
  • ReviewLevel: Non peer-reviewed dataset
  • DatasetOrigin: Data derived from previous dataset; ProteomeXchange accession number: PXD000066
  • RepositorySupport: Supported dataset by repository
  • PrimarySubmitter: Zhi Sun
  • Title: Reprocessed: In-depth membrane proteomic study of breast cancer tissues
  • Description: Proteomics on Human breast cancer tissue samples. 9 patients with high risk or 9 patiens low risk MammaPrint breast cancer. Membran fraction. Proteins were reduced, alkylated, digested with Lys-C and Trypsin, and labelled with iTRAQ4plex: 114; high risk; 115; low risk. Reprocessed by PeptideAtlas;
  • SpeciesList: scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
  • ModificationList: isotope labeled residue; iTRAQ4plex-114 reporter+balance reagent acylated residue; S-carboxamidomethyl-L-cysteine; L-methionine sulfoxide
  • Instrument: LTQ Orbitrap Velos

Dataset History

VersionDatetimeStatusChangeLog Entry
02013-12-20 10:39:45ID requested
12013-12-20 11:37:18announced

Publication List

  1. no publication

Keyword List

  1. curator keyword: human, breast cancer, membrane protein

Contact List

    Zhi Sun
    • contact affiliation: Institute for Systems Biology
    • contact email: zhi.sun@systemsbiology.org
    • dataset submitter:
    Eric Deutsch
    • contact affiliation: Institute for Systems Biology
    • contact email: edeutsch@systemsbiology.org
    • lab head:

Full Dataset Link List

  1. PeptideAtlas dataset URI
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