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PXD080956

PXD080956 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleDistribution, assembly and mechanism of GluN1/GluN3A excitatory glycine receptors
DescriptionNMDA receptors play key roles in brain development, plasticity and diseases. While glutamate and glycine co-gated GluN2-containing NMDARs have been extensively characterized, little is known regarding GluN3A-containing NMDARs that form receptors gated by glycine only. Here, combining native purification, mass spectrometry, cryo-EM and electrophysiology, we provide key insights on the molecular logic of GluN3A-NMDARs. We demonstrate that native GluN3A receptors account for a sizeable fraction of total NMDARs, are enriched at extrasynaptic compartments in the adult brain, and assemble as diheteromeric GluN1/GluN3A excitatory glycine receptors (eGlyRs) rather than as triheteromeric GluN1/GluN2/GluN3A receptors. The architecture of eGlyRs reveal splayed and loosely packed extracellular domains, strikingly different from ‘conventional’ GluN1/GluN2 receptors. Through back-and-forth structural and functional validations, we demonstrate how the combined effects of a weak ligand-binding domain (LBD) dimer interface and high intrinsic mobility of the N-terminal domains (NTDs) shape the atypical gating of eGlyRs. These findings illuminate GluN3A-NMDAR physiology and mechanism, with implications for neuronal signaling and pharmacology.
HostingRepositoryiProX
AnnounceDate2026-07-13
AnnouncementXMLSubmission_2026-07-13_01:43:27.412.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterNan Zhao
SpeciesList scientific name: Mus musculus; NCBI TaxID: 10090;
ModificationListNo PTMs are included in the dataset
InstrumentOrbitrap Exploris 480
Dataset History
RevisionDatetimeStatusChangeLog Entry
02026-07-13 01:43:11ID requested
12026-07-13 01:43:28announced
Publication List
Dataset with its publication pending
Keyword List
submitter keyword: NMDAR, GluN1/GluN3A, CryoEM, Mass Spectrometry, electrophysiology
Contact List
Lihua Zhang
contact affiliationDalian Institute of Chemical Physics
contact emaillihuazhang@dicp.ac.cn
lab head
Nan Zhao
contact affiliationDalian Institute of Chemical Physics
contact emailzhaonan@dicp.ac.cn
dataset submitter
Full Dataset Link List
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