⮝ Full datasets listing
PXD076731
PXD076731 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | S. elongatus PCC 7942 Circadian Control Proteomics; phosphorylation and acetyl PTMs (PB-DP3) |
| Description | S. elongatus (dilute OD) circadian experiment. TMT18 fractions for proteomics to identify phosphorylation and acetylation post-translational modifications. Global and redox PTM proteomics for the same samples are available under accession number MSV000099892. Samples were processed with using the SP3-based multi-PTM workflow (Gluth et al, 2024, MCP). Data were searched using MS-GF+, and PlexedPiper was used to link peptide identifications with MASIC quantification data. Normalization was performed using the global median method, and PTM data were further normalized to the corresponding global dataset. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-04-08 |
| AnnouncementXML | Submission_2026-04-08_14:51:38.285.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Synechococcus elongatus PCC 7942; NCBI TaxID: 1140; |
| ModificationList | Oxidation; Phospho; Nethylmaleimide; TMTpro |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2026-04-07 23:14:53 | ID requested | |
| ⏵ 1 | 2026-04-08 14:51:38 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: circadian, S. elongatus, DatasetType:Proteomics |
Contact List
| Song Feng | |
|---|---|
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | song.feng@pnnl.gov |
| lab head | |
| Margaret S. Cheung | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | margaret.cheung-wyker@pnnl.gov |
| lab head | |
| Wei-Jun Qian | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | Weijun.Qian@pnnl.gov |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v12/MSV000101402/ |
