⮝ Full datasets listing
PXD076680
PXD076680 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | dia-PASEF based Complexome Profiling of Mitochondria from Arabidopsis thaliana Liquid Cell Culture |
| Description | Protein complexes of Arabidopsis thaliana mitochondria, isolated from liquid cell cultures, were analyzed using Blue Native polyacrylamide gel electrophoresis (BN-PAGE) followed by complexome profiling. The gel was cut into 30 fractions (2 mm each), starting from the I+III2 supercomplex downwards. Each slice was tryptically digested, and peptides per fraction were analyzed via a custom dia-PASEF acquisition scheme. Data were analyzed with FragPipe and DIA-NN. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-07-02 |
| AnnouncementXML | Submission_2026-07-02_06:03:07.980.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Nils Rugen |
| SpeciesList | scientific name: Arabidopsis thaliana; common name: thale cress; NCBI TaxID: 3702; |
| ModificationList | Carbamidomethyl |
| Instrument | timsTOF Pro |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2026-04-07 06:50:26 | ID requested | |
| ⏵ 1 | 2026-07-02 06:03:09 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: Arabidopsis, Liquid Cell Culture, Mitochondria, Complexome Profiling, DIA, FragPipe, diaTracer, DIA-NN, DatasetType:Proteomics |
Contact List
| Nils Rugen | |
|---|---|
| contact affiliation | Leibniz University Hannover |
| contact email | rugen@genetik.uni-hannover.de |
| lab head | |
| Nils Rugen | |
| contact affiliation | Leibniz University Hannover |
| contact email | rugen@genetik.uni-hannover.de |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v12/MSV000101397/ |
