⮝ Full datasets listing
PXD073850
PXD073850 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | ROME BioID2 raw proteomics data from ROME KO manuscript |
| Description | For proteomics, samples were heated for 10 min at 95 degrees. After cooling down to room temperature, 4 uL of 500 mM IAA in 5%SDS was added to a final concentration of 40 mM and incubated in the dark for 30 min. Undissolved matter was centrifuged for 8 min at 13,000 x g. The supernatant was saved and used for downstream processing using a S-Trap column (ProtiFi, LLC). Proteins were digested with sequencing-grade Lys-C/trypsin (Promega) by incubation at 37 degrees overnight. Peptides were analyzed with a nanoAcquity UPLC system coupled with Orbitrap Fusion Lumos mass spectrometer (ThermoFisher) as previously described. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-03-05 |
| AnnouncementXML | Submission_2026-03-05_09:00:28.405.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Anna Molotkova |
| SpeciesList | scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; |
| ModificationList | No PTMs are included in the dataset |
| Instrument | nanoACQUITY UPLC; Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2026-01-30 10:01:12 | ID requested | |
| ⏵ 1 | 2026-03-05 09:00:28 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: BioID2, ROME, proteomics, DatasetType:Proteomics |
Contact List
| Aykut Uren | |
|---|---|
| contact affiliation | Georgetown University Medical Center |
| contact email | au26@georgetown.edu |
| lab head | |
| Anna Molotkova | |
| contact affiliation | Georgetown University Medical Center |
| contact email | am3599@georgetown.edu |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v12/MSV000100665/ |
