⮝ Full datasets listing
PXD071782
PXD071782 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Label-free quantification of MCF10A cell culture proteome (DIA) stably expressing BAD3SA in 2D vs 3D |
| Description | Global shotgun proteomic analysis using data independent acquisition (DIA) and Spectronaut analysis on the input cell lysates before the enrichment step in proximity labeling experiments, specifically MCF10A cells stably expressing Bcl2-associated agonist of cell death (BAD) with three serine to alanine mutations (S75A, S99A, S118A) fused with miniTurbo (miniTurbo-BAD3SA) in 2D with biotin treatment (n=3) and miniTurbo-BAD3SA in 3D with biotin treatment (n=4). The file "L20240424-miniTurbo-BAD-WT-vs-3SA-DIA.sne" contains Spectronaut search result including miniTurbo-BAD WT 2D and 3D shotgun samples found under the identifier MSV000094824 (2D) and MSV000094825 (3D). |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-12-10 |
| AnnouncementXML | Submission_2025-12-10_10:34:06.079.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Olivier Julien |
| SpeciesList | scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606; |
| ModificationList | Acetyl; Oxidation; Carbamidomethyl |
| Instrument | Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-12-09 14:45:07 | ID requested | |
| ⏵ 1 | 2025-12-10 10:34:06 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: BAD, miniTurbo, BioID, LFQ, DIA, DatasetType:Proteomics |
Contact List
| Olivier Julien | |
|---|---|
| contact affiliation | University of Alberta |
| contact email | ojulien@ualberta.ca |
| lab head | |
| Ing Swie Goping | |
| contact affiliation | University of Alberta |
| contact email | igoping@ualberta.ca |
| lab head | |
| Olivier Julien | |
| contact affiliation | University of Alberta |
| contact email | ojulien@ualberta.ca |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v11/MSV000100168/ |
