⮝ Full datasets listing
PXD071238
PXD071238 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Activity-based protein profiling of meropenem targets in Mycobacterium abscessus |
| Description | Activity-based protein profiling data from Mycobacterium abscessus (Mab) laboratory strain 19977 and clinical strain M9510 grown under replicating and carbon-starvation conditions with meropenem probe labeling or no probe control (npc). Proteins were obtained from Mab cultures lysed by bead beating and labeled with probes followed by click chemistry attachment of biotin. After streptavidin enrichment, bead-bound proteins were digested with trypsin and the peptides analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-04-07 |
| AnnouncementXML | Submission_2026-04-07_11:12:27.444.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Mycobacterium abscessus ATCC 19977; NCBI TaxID: 561007; |
| ModificationList | Oxidation |
| Instrument | Q Exactive Plus |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-11-25 18:10:57 | ID requested | |
| ⏵ 1 | 2026-04-07 11:12:27 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: activity-based protein profiling, beta lactam, DatasetType:Proteomics |
Contact List
| Kimberly Beatty | |
|---|---|
| contact affiliation | Oregon Health and Science University (OHSU) |
| contact email | beattyk@ohsu.edu |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v11/MSV000100028/ |
