⮝ Full datasets listing
PXD070768
PXD070768 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | S. elongatus PCC 7942 Proteome Integral Solubility Alteration (PISA) Proteomics - Light vs Dark with Dense and Dilute |
| Description | PISA experimental assays investigating structural alterations in Light vs Dark growth conditions with Dense and Dilute conditions. Samples are representative of Synechococcus elongatus PCC 7942 cell lysates (BTO:0004304). Purpose: Detecting structural and abundance changes in cyanobacterial cultures grown in conditions mimicking environmental perturbations such as dense light, dense dark, dilute light, and dilute dark. Technique: Proteome Integral Solubility Assay (PISA) and Global Proteomics. Other Details: TMT10 Labelled, Not-fractionated, 3 plexes in total (Plex1- PISA Dense Light and Dark, Plex2- PISA Dilute Light and Dark, Plex3- Global Dilute Light and Dark, No global proteomics for dense samples). Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-11-19 |
| AnnouncementXML | Submission_2025-11-19_10:11:49.703.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Synechococcus elongatus PCC 7942; NCBI TaxID: 1140; |
| ModificationList | Oxidation; TMT6plex |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-11-14 18:23:09 | ID requested | |
| ⏵ 1 | 2025-11-19 10:11:50 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: Proteome Integral Solubility Alteration, PISA, DatasetType:Proteomics |
Contact List
| Snigdha Sarkar | |
|---|---|
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | snigdha.sarkar@pnnl.gov |
| lab head | |
| John T. Melchior | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | john.melchior@pnnl.gov |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v11/MSV000099914/ |
