⮝ Full datasets listing
PXD070761
PXD070761 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | S. elongatus PCC 7942 Circadian Thermo Proteo Profiling (TPP) Proteomics - Light vs Dark with Dense and Dilute |
| Description | TMT10-labeled samples from TPP experimental assays investigating structural alterations in Light vs Dark growth conditions with Dense and Dilute cultures. Samples are Synechococcus elongatus PCC 7942 cell lysates (BTO:0004304). Purpose: Detecting structural remodeling across cyanobacterial proteome under conditions mimicking environmental perturbations such as dense light, dense dark, dilute light, and dilute dark. Technique: Thermal Proteome Profiling (TPP). Other details: Labeled with TMT-10, Not-fractionated, 20 plexes (5 dense light, 5 dense dark, 5 dilute light, 5 dilute dark) in total. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-11-19 |
| AnnouncementXML | Submission_2025-11-19_10:11:38.915.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Synechococcus elongatus PCC 7942; NCBI TaxID: 1140; |
| ModificationList | Oxidation; TMT6plex |
| Instrument | Q Exactive HF-X |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-11-14 15:09:23 | ID requested | |
| ⏵ 1 | 2025-11-19 10:11:39 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: Thermal Proteome Profiling, TPP, DatasetType:Proteomics |
Contact List
| Snigdha Sarkar | |
|---|---|
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | snigdha.sarkar@pnnl.gov |
| lab head | |
| John T. Melchior | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | john.melchior@pnnl.gov |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v11/MSV000099912/ |
