PXD070123 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Lake Zurich Bacterial Integrated Time Series (LZ-BITS) |
| Description | This study investigates temporal dynamics in microbial community function within the freshwater ecosystem of Lake Zurich, Switzerland, over three months (36 timepoints). Metagenome-assembled genomes (MAGs) and metaproteomes were analyzed to identify species-specific and community-level protein expression patterns. The study explores how bacterial species contribute to ecosystem functioning through protein-level activity, focusing on relationships between species taxonomy, abundance, and protein investment patterns. |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-06-02 |
| AnnouncementXML | Submission_2026-06-02_06:06:59.908.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | Cyrill Hofer |
| SpeciesList | scientific name: lake water metagenome; NCBI TaxID: NEWT:1647806; |
| ModificationList | monohydroxylated residue; iodoacetamide derivatized residue |
| Instrument | Orbitrap Fusion Lumos |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2025-10-30 16:59:02 | ID requested | |
| ⏵ 1 | 2026-06-02 06:07:01 | announced | |
Publication List
Keyword List
| submitter keyword: proteome dynamics, DIA-NN, bacterial communities, freshwater lake, metagenomics,DIA, time-series, metaproteomics, LC-MS/MS |
Contact List
| Adrian-Stefan Andrei |
|---|
| contact affiliation | Limnological Station, University of Zurich |
| contact email | stefan.andrei@limnol.uzh.ch |
| lab head | |
| Cyrill Hofer |
|---|
| contact affiliation | University of Zurich, Limnological Station |
| contact email | cyrill.hofer@uzh.ch |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/06/PXD070123 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD070123
- Label: PRIDE project
- Name: Lake Zurich Bacterial Integrated Time Series (LZ-BITS)
