PXD064013 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | The surfaceome of chondrogenic cells |
| Description | Chondrogenesis, the process through which cartilage forms, has implications for cartilage repair and osteoarthritis (OA) management. In this study, we present the first comprehensive quantitative analysis of the surfaceome of chondrogenic cells using a well-established in vitro chondrogenic model. By employing glycocapture-assisted enrichment targeting sialic acid residues on surface proteins, combined with high-throughput shotgun mass spectrometry, we identified novel components of the chondrogenic cell surfaceome. |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-01-19 |
| AnnouncementXML | Submission_2026-01-19_02:08:24.756.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Unsupported dataset by repository |
| PrimarySubmitter | David Boocock |
| SpeciesList | scientific name: Gallus gallus (Chicken); NCBI TaxID: NEWT:9031; |
| ModificationList | iodoacetamide derivatized residue |
| Instrument | ZenoTOF 7600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2025-05-16 07:52:03 | ID requested | |
| ⏵ 1 | 2026-01-19 02:08:25 | announced | |
Publication List
| Kov, á, cs P, Brazda P, Hajd, ú T, Hars, á, nyi B, Juh, á, sz K, Tak, á, cs R, V, á, g, ó J, Wang Z, Coveney C, Boocock DJ, Matta C, Podocalyxin and ciliary neurotrophic factor receptor are novel components of the surfaceome of chondrogenic cells. Cell Commun Signal, 24(1):8(2025) [pubmed] |
| 10.1186/s12964-025-02552-x; |
Keyword List
| submitter keyword: glycocapture, osteoarthritis, cartilage,surfaceome |
| chondrogenesis, cartilage regeneration |
Contact List
| David Boocock |
|---|
| contact affiliation | John van Gesst Cancer Research Centre, Nottingham Trent University, Nottingham NG11 8NS |
| contact email | david.boocock@ntu.ac.uk |
| lab head | |
| David Boocock |
|---|
| contact affiliation | Nottingham Trent University |
| contact email | david.boocock@ntu.ac.uk |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/01/PXD064013 |
| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD064013
- Label: PRIDE project
- Name: The surfaceome of chondrogenic cells
