⮝ Full datasets listing
PXD063748
PXD063748 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Soil metaproteomes from long term soil warming experiments in Blodgett Forest, CA |
| Description | Metaproteomic data for soil samples from paired control and warming plots in Blodgett Forest, CA. Soil samples across a depth profile (5 depth intervals, 0-10 cm, 10-30 cm, 30-45 cm, 45-60 cm, 60-80 cm) were taken from 3 paired control and warming plots after 4.5 years of warming. Samples were digested with trypsin, and analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2026-08-03 |
| AnnouncementXML | Submission_2026-08-03_17:07:31.974.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: environmental samples |
| ModificationList | No PTMs are included in the dataset |
| Instrument | Q Exactive HF-X |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2025-05-07 18:17:50 | ID requested | |
| ⏵ 1 | 2026-08-03 17:07:32 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: soils, soil warming, metaproteome, nutrient cycling, DatasetType:Proteomics |
Contact List
| Ulas Karaoz | |
|---|---|
| contact affiliation | Lawrence Berkeley National Laboratory |
| contact email | ukaraoz@lbl.gov |
| lab head | |
| Eoin L. Brodie | |
| contact affiliation | Lawrence Berkeley National Laboratory |
| contact email | elbrodie@lbl.gov |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v09/MSV000097826/ |
