PXD063631

PXD063631 is an original dataset announced via ProteomeXchange.

Title	Insilico TOF top-down proteomics datasets generated using FTMS simulator (Spectroswiss)
Description	This dataset consists of in silico generated TOF top-down proteomics spectra created using the FTMS simulator software (Spectroswiss). The simulated datasets are designed to evaluate FDR estimation in spectral deconvolution. Protein sequences were used to generate MS datasets with varying resolution, noise, and charge characteristics. The dataset includes deconvolved TSV files and corresponding input mzML insilico file.
HostingRepository	PRIDE
AnnounceDate	2026-03-09
AnnouncementXML	Submission_2026-03-09_00:45:03.881.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ayesha Feroz
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive

Revision	Datetime	Status	ChangeLog Entry
0	2025-05-06 02:53:45	ID requested
⏵ 1	2026-03-09 00:45:04	announced

Dataset with its publication pending

submitter keyword: FTMS simulator, in silico, human proteins, deconvolution,Top-down proteomics, Orbitrap

Kyowon Jeong
contact affiliation	Postdoc kohlbacher lab, Applied Bioinformatics, Department for Computer Science, University of Tübingen Sand 14, 72076 Tübingen, Germany
contact email	kyowon.jeong@uni-tuebingen.de
lab head
Ayesha Feroz
contact affiliation	PhD student/ Researcher
contact email	ayesha.feroz@uni-tuebingen.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/03/PXD063631

PRIDE project URI

• PRIDE
  1. PXD063631
     1. Label: PRIDE project
     2. Name: Insilico TOF top-down proteomics datasets generated using FTMS simulator (Spectroswiss)