PXD063163

PXD063163 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	tRF-24 RNA pulldown in KYSE150 and KYSE30
Description	To delineate the oncogenic mechanism of tRF-24 in ESCC, we performed RNA pull-down assays with biotinylated tRF-24 and antisense control, followed by mass spectrometry (MS) analysis.
HostingRepository	PRIDE
AnnounceDate	2025-12-01
AnnouncementXML	Submission_2025-11-30_16:08:38.757.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Hu Yajie
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	No PTMs are included in the dataset
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-04-21 18:23:38	ID requested
⏵ 1	2025-11-30 16:08:39	announced

Publication List

Hu Y, Qin X, Gong L, Pan L, Cheng Y, tRNA-derived fragment tRF-24 drives CELF1 phase separation to promote oncogenic splicing in esophageal squamous cell carcinoma. J Exp Clin Cancer Res, 44(1):307(2025) [pubmed]
10.1186/s13046-025-03553-x;

Hu Y, Qin X, Gong L, Pan L, Cheng Y, tRNA-derived fragment tRF-24 drives CELF1 phase separation to promote oncogenic splicing in esophageal squamous cell carcinoma. J Exp Clin Cancer Res, 44(1):307(2025) [pubmed]

10.1186/s13046-025-03553-x;

Keyword List

submitter keyword: Human, KYSE30, esophagus, RNA-pulldown, KYSE150

submitter keyword: Human, KYSE30, esophagus, RNA-pulldown, KYSE150

Contact List

Yufeng Cheng
contact affiliation	Department of Radiation Oncology, Qilu Hospital of Shandong University, Jinan, China.
contact email	qlyycyf1965@163.com
lab head
Hu Yajie
contact affiliation	ShandongUniversity
contact email	sduhuyajie@163.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/12/PXD063163
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/12/PXD063163

PRIDE project URI

Repository Record List

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