PXD063033

PXD063033 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Design and Characterisation of Photoactivatable and Lysine Reactive Ortho Nitrobenzyl Alcohol-Based Crosslinkers
Description	In this study, we performed a systematic analysis of ortho nitrobenzyl alcohol (oNBA) chemistry for integration into novel reagents for chemical crosslinking-mass spectrometry.
HostingRepository	PRIDE
AnnounceDate	2025-08-04
AnnouncementXML	Submission_2025-08-03_16:09:42.261.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Antonio Calabrese
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: 562; scientific name: Bos taurus (Bovine); NCBI TaxID: 9913;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-04-16 07:58:53	ID requested
⏵ 1	2025-08-03 16:09:43	announced

Publication List

10.1039/d5sc03211c;
Cahill A, Walko M, Fenton B, Ganji SR, Herbert A, Radford SE, Kapur N, Livingstone K, Wright MH, Calabrese AN, -nitrobenzyl alcohol-based crosslinkers. Chem Sci, 16(33):15239-15255(2025) [pubmed]

10.1039/d5sc03211c;

Cahill A, Walko M, Fenton B, Ganji SR, Herbert A, Radford SE, Kapur N, Livingstone K, Wright MH, Calabrese AN, -nitrobenzyl alcohol-based crosslinkers. Chem Sci, 16(33):15239-15255(2025) [pubmed]

Keyword List

submitter keyword: XL-MS, oNBA, crosslinking

submitter keyword: XL-MS, oNBA, crosslinking

Contact List

Antonio Calabrese
contact affiliation	Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, School of Molecular and Cellular Bilogy, University of Leeds, LS2 9JT
contact email	a.calabrese@leeds.ac.uk
lab head
Antonio Calabrese
contact affiliation	School of Molecular and Cellular Biology, University of Leeds
contact email	a.calabrese@leeds.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/08/PXD063033
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/08/PXD063033

PRIDE project URI

Repository Record List

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