PXD062995

PXD062995 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Comparison of culture supernatants from wild-type Vibrio cholerae and a mutant lacking the PDZ domain of the type II secretion system
Description	The culture supernatant of wild-type (WT) Vibrio cholerae N16961 and mutant epsC∆PDZ strains were compared to determine which, if any, type II secretion system substrates were affected by the deletion of the PDZ domain of EpsC
HostingRepository	PRIDE
AnnounceDate	2025-08-25
AnnouncementXML	Submission_2025-08-24_16:29:44.550.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD062995
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Maria Sandkvist
SpeciesList	scientific name: Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961); NCBI TaxID: 243277;
ModificationList	iodoacetamide derivatized residue
Instrument	Orbitrap Fusion Lumos

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-04-15 11:13:19	ID requested
⏵ 1	2025-08-24 16:29:45	announced

Publication List

10.1128/jb.00144-25;
Shannon A, Johnson T, Roberts CS, Chaton CT, Korotkov KV, Sandkvist M, . J Bacteriol, 207(8):e0014425(2025) [pubmed]
10.6019/PXD062995;

10.1128/jb.00144-25;

Shannon A, Johnson T, Roberts CS, Chaton CT, Korotkov KV, Sandkvist M, . J Bacteriol, 207(8):e0014425(2025) [pubmed]

10.6019/PXD062995;

Keyword List

submitter keyword: Vibrio cholerae, T2SS, PDZ, protein secretion, GspC

submitter keyword: Vibrio cholerae, T2SS, PDZ, protein secretion, GspC

Contact List

Maria Sandkvist, PhD
contact affiliation	Department of Microbiology and Immunology University of Michigan Medical School 1150 West Medical Center drive 6744 Med Sci II Ann Arbor, MI 48109 Phone: 734-764-3552
contact email	mariasan@umich.edu
lab head
Maria Sandkvist
contact affiliation	University of Michigan
contact email	mariasan@umich.edu
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/08/PXD062995
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/08/PXD062995

PRIDE project URI

Repository Record List

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