PXD062717

PXD062717 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Ser2 phosphorylation of RPB1 on snRNA gene is suppressed for accurate transcription termination by 7SK snRNA. We analyzed Coilin BioID mass spectrometry data comparing siControl-treated cells with cells treated with siRNA targeting 7SK snRNA.
Description	The dataset uploaded here is mass spectrometry data from Coilin BioID experiments comparing siControl (siCT) and si7SK snRNA knockdown conditions. The purpose of this analysis is to investigate how depletion of 7SK snRNA affects the composition of Cajal body-associated factors. By comparing the two conditions, we aim to identify proteins whose association with Coilin—and potentially with Cajal bodies—is altered when 7SK is knocked down.
HostingRepository	jPOST
AnnounceDate	2025-06-12
AnnouncementXML	Submission_2025-06-11_14:36:14.854.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Ogawa Shintaro
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	S-carboxamidomethyl-L-cysteine; alpha-amino acetylated residue
Instrument	LTQ Orbitrap Elite

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-04-08 01:56:31	ID requested
⏵ 1	2025-06-11 14:36:15	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Coilin BioID

submitter keyword: Coilin BioID

Contact List

Hidehisa Tkahashi
lab head
Ogawa Shintaro
contact affiliation	Yokohama City University Dept of Morecularbiology
dataset submitter

Full Dataset Link List

jPOST dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003752/

jPOST dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.jpostdb.org/JPST003752/