PXD061680

PXD061680 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Pulldown proteomics of XybR in SirexAA-E
Description	Streptomyces sp. SirexAA-E chnages secretion of enzymes that can degrade xylan. These enzymes transcription is regulated by a transcriptional regulator. To determine the dominant regulator, we performed pulldown proteomics, using some promoter regions (P0265, P0357, P5230) which are related to xylan catabolism of S. SirexAA-E. Intracellular proteomes were from glucose-grown cells and xylan-grown cells.
HostingRepository	PRIDE
AnnounceDate	2025-11-11
AnnouncementXML	Submission_2025-11-10_21:13:09.880.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Taichi E. Takasuka
SpeciesList	scientific name: Streptomyces sp. SirexAA-E; NCBI TaxID: NEWT:862751;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive Plus

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-03-11 00:41:03	ID requested
⏵ 1	2025-11-10 21:13:10	announced

Publication List

10.1128/SPECTRUM.02251-25;

10.1128/SPECTRUM.02251-25;

Keyword List

submitter keyword: pulldown proteomics, xylan, hemicellulose, transcriptonal regulator

submitter keyword: pulldown proteomics, xylan, hemicellulose, transcriptonal regulator

Contact List

Taichi E. Takasuka
contact affiliation	Research Faculty of Agriculture, Hokkaido University
contact email	tendo.nd@gmail.com
lab head
Taichi E. Takasuka
contact affiliation	Research Faculty of Agriculture, Hokkaido University
contact email	tendo.nd@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/11/PXD061680
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/11/PXD061680

PRIDE project URI

Repository Record List

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