PXD061633

PXD061633 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteome profiling of IEC-6 cells after treatment with Akkermansia muciniphila (AM), Bifidobacterium longum (BL), or AM-BL combination
Description	To profile the proteome of intestinal epithelial IEC-6 cells in response to treatment with Akkermansia muciniphila, Bifidobacterium longum, or Akkermansia muciniphila + Bifidobacterium longum co-culture. In addition, we also add arabinoxylan (AX) to Akkermansia muciniphila + Bifidobacterium longum combination since we previously found that this glycan enhance their synergistic effect.
HostingRepository	PRIDE
AnnounceDate	2025-09-24
AnnouncementXML	Submission_2025-09-24_04:58:36.291.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jordy Evan Sulaiman
SpeciesList	scientific name: Rattus norvegicus (Rat); NCBI TaxID: 10116;
ModificationList	No PTMs are included in the dataset
Instrument	timsTOF Pro

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-03-09 23:36:20	ID requested
⏵ 1	2025-09-24 04:58:36	announced

Publication List

10.3389/FMICB.2025.1666747;

10.3389/FMICB.2025.1666747;

Keyword List

submitter keyword: IEC-6, Akkermansia muciniphila, Bifidobacterium longum, co-culture

submitter keyword: IEC-6, Akkermansia muciniphila, Bifidobacterium longum, co-culture

Contact List

Henry Lam
contact affiliation	Chemical and Biological Engineering, Hong Kong University of Science and Technology (HKUST)
contact email	kehlam@ust.hk
lab head
Jordy Evan Sulaiman
contact affiliation	The Hong Kong University of Science and Technology (HKUST)
contact email	jesulaiman@connect.ust.hk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD061633
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/09/PXD061633

PRIDE project URI

Repository Record List

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