PXD061604

PXD061604 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Global and phosphoproteomics in control and TP53RK-deficient HT29 cells
Description	We compared the global proteome and phosphoproteome between control and TP53RK-deficient HT29 cells using tandem mass tag (TMT) labeling for quantitative analysis.
HostingRepository	PRIDE
AnnounceDate	2025-10-27
AnnouncementXML	Submission_2025-10-26_18:51:55.601.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Seojin Yang
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	TMT6plex-126 reporter+balance reagent acylated residue; phosphorylated residue; iodoacetamide derivatized residue
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-03-08 05:28:21	ID requested
⏵ 1	2025-10-26 18:51:56	announced

Publication List

Choi Y, Park S, Yang S, Kim E, Cho Y, Yang HJ, Yi EC, Song SH, Kim TY, Identifying TP53RK as a key regulator of colorectal cancer survival and a potential therapeutic target. Sci Rep, 15(1):36122(2025) [pubmed]
10.1038/s41598-025-21082-7;

Choi Y, Park S, Yang S, Kim E, Cho Y, Yang HJ, Yi EC, Song SH, Kim TY, Identifying TP53RK as a key regulator of colorectal cancer survival and a potential therapeutic target. Sci Rep, 15(1):36122(2025) [pubmed]

10.1038/s41598-025-21082-7;

Keyword List

submitter keyword: HT29, TMT, TP53RK, cell line, LC-MS/MS

submitter keyword: HT29, TMT, TP53RK, cell line, LC-MS/MS

Contact List

Tae-You Kim
contact affiliation	Department of Molecular Medicine and Biopharmaceutical Sciences, Graduate School of Convergence Science and Technology, Seoul National University, Seoul 03080, Republic of Korea
contact email	kimty@snu.ac.kr
lab head
Seojin Yang
contact affiliation	Seoul National University
contact email	tjfla006@naver.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD061604
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD061604

PRIDE project URI

Repository Record List

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