PXD060573 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | A Technical Evaluation of Plasma Proteomics Technologies |
Description | We report a technical evaluation of six notable plasma proteomics technologies from recent years. Unenriched plasma, perchloric acid depletion, PreOmics ENRICHplus, Mag-Net, Seer Proteograph XT, and Olink Explore HT. The methods were compared on proteomic depth, reproducibility, linearity, tolerance to lipid interference, and limit of detection/quantification. We also tested the applicability of these methods for detecting differences between healthy and cancer groups in a non-small cell lung cancer cohort. |
HostingRepository | PRIDE |
AnnounceDate | 2025-05-14 |
AnnouncementXML | Submission_2025-05-13_16:14:30.018.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Joshua Coon |
SpeciesList | scientific name: Gallus gallus (Chicken); NCBI TaxID: 9031; scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | No PTMs are included in the dataset |
Instrument | Orbitrap Astral |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2025-02-07 01:14:38 | ID requested | |
⏵ 1 | 2025-05-13 16:14:30 | announced | |
Publication List
Keyword List
submitter keyword: Plasma, LC-MS, Proteomics |
Contact List
Joshua J. |
contact affiliation | University of Wisconsin-Madison, Morgridge Institute for Research |
contact email | jcoon@chem.wisc.edu |
lab head | |
Joshua Coon |
contact affiliation | University of Wisconsin - Madison,
Morgridge Institute for Research |
contact email | jcoon@chem.wisc.edu |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD060573 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD060573
- Label: PRIDE project
- Name: A Technical Evaluation of Plasma Proteomics Technologies