PXD060552

PXD060552 is an original dataset announced via ProteomeXchange.

Title	Changes in the proteomic profiles in Arabidopsis roots resulting from loss of SYNAPTOTAGMIN 1 function and salt stress
Description	This study examines how sodium chloride treatment affects the proteomic profile in wild-type and syt1 mutant roots. We found many proteins whose abundance was affected by salt stress in both genotypes. However, the abundance of only several proteins was affected by the mutation in SYT1. Together, this motivated us to perform a more detailed molecular biology analysis of the syt1.2 allele. We showed that a shorter sequence was still transcribed; however, the abundance of the truncated SYT1 transcript in the mutant allele was significantly lower in comparison with wild-type plants.
HostingRepository	PRIDE
AnnounceDate	2025-11-04
AnnouncementXML	Submission_2025-11-04_07:26:24.250.xml
DigitalObjectIdentifier	https://dx.doi.org/10.6019/PXD060552
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Supported dataset by repository
PrimarySubmitter	Maksym Danchenko
SpeciesList	scientific name: Arabidopsis thaliana (Mouse-ear cress); NCBI TaxID: NEWT:3702;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	LTQ Orbitrap Elite

Revision	Datetime	Status	ChangeLog Entry
0	2025-02-06 09:15:17	ID requested
⏵ 1	2025-11-04 07:26:24	announced

10.1186/S12870-025-07665-6;

10.6019/PXD060552;

submitter keyword: Arabidopsis thaliana, cytoskeleton,Abiotic stress, SYT1, NaCl

Peter Baráth
contact affiliation	Department of Glycobiology, Institute of Chemistry, Slovak Academy of Sciences
contact email	peter.barath@savba.sk
lab head
Maksym Danchenko
contact affiliation	Plant Science and Biodiversity Center SAS
contact email	maxymdan@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/11/PXD060552

PRIDE project URI

• PRIDE
  1. PXD060552
     1. Label: PRIDE project
     2. Name: Changes in the proteomic profiles in Arabidopsis roots resulting from loss of SYNAPTOTAGMIN 1 function and salt stress