PXD059992

PXD059992 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	13C or 15N labeled metaproteome of phototrophic microbial mats from Goodenough soda lake in the Cariboo Plateau region of British Columbia, Canada
Description	In this study, we used 13C and 15N labeled substrates to assess the carbon (C) and nitrogen (N) assimilation by detecting 13C and 15N in proteins from microorganisms in the phototrophic microbial mats in a soda lake on the Cariboo Plateau, British Columbia, Canada. Metagenomic database used for protein identification and metagenome assembled genome membership had been previousl generated in Zorz et.al. (2019).
HostingRepository	PRIDE
AnnounceDate	2025-10-23
AnnouncementXML	Submission_2025-10-22_20:02:03.326.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Yihua Liu
SpeciesList	scientific name: Cyanobacteria; NCBI TaxID: NEWT:1117; scientific name: Gammaproteobacteria; NCBI TaxID: NEWT:1236;
ModificationList	(13)C isotope tagged reagent; (15)N isotope tagged reagent
Instrument	Q Exactive

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-01-20 15:26:53	ID requested
⏵ 1	2025-10-22 20:02:03	announced

Publication List

10.1093/ISMEJO/WRAF226;

10.1093/ISMEJO/WRAF226;

Keyword List

submitter keyword: microbial ecology, cyanobacteria, carbon assimilation, metaproteome, stable isotope probing, microbial mats, nitrogen assimilation,Q Exactive Plus, Protein-SIP, metaproteomics, soda lake

submitter keyword: microbial ecology, cyanobacteria, carbon assimilation, metaproteome, stable isotope probing, microbial mats, nitrogen assimilation,Q Exactive Plus, Protein-SIP, metaproteomics, soda lake

Contact List

Marc Strous
contact affiliation	Microbial Markets Lab, Department of Earth, Energy, and Environment, University of Calgary, Calgary, AB, Canada
contact email	mstrous@ucalgary.ca
lab head
Yihua Liu
contact affiliation	University of Calgary
contact email	yihualiued@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD059992
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD059992

PRIDE project URI

Repository Record List

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