PXD059727

PXD059727 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	A universal peptide and any peptidoform spectrum annotator for mass spectrometry-based proteomics
Description	Example dataset for Annotator tool. Data includes: - the top-down data of Fab of Herceptin, summed and deconvoluted, measured on Eclipse; - the bottom-up data of O-glycosylation of human colostrum IgA, measured on ZenoTOF 7600 using EAD; - the bottom-up data of N-glycosylation of human plasma, measured on ZenoTOF 7600 using EACID.
HostingRepository	MassIVE
AnnounceDate	2025-01-13
AnnouncementXML	Submission_2025-01-13_06:07:25.568.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Shelley Jager
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	unknown modification; unknown modification
Instrument	ZenoTOF 7600; Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2025-01-13 05:25:50	ID requested
⏵ 1	2025-01-13 06:07:25	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: PTMs, top-down, Glycans, Bottom-up, DatasetType:Proteomics

submitter keyword: PTMs, top-down, Glycans, Bottom-up, DatasetType:Proteomics

Contact List

Joost Snijder
contact affiliation	Utrecht University
contact email	j.snijder@uu.nl
lab head
Shelley Jager
contact affiliation	Utrecht University
contact email	s.jager@uu.nl
dataset submitter

Full Dataset Link List

MassIVE dataset URI
Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v06/MSV000096837/

MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v06/MSV000096837/