PXD059692

PXD059692 is an original dataset announced via ProteomeXchange.

Title	Proteomics results of rice seeds
Description	To explore the isomerization levels of proteins in the seed, we performed a mass spectrometry-based proteomics analysis of the seed samples from the Nip and Daat1 groups. We achieved a robust workflow with high proteome depth, quantifying 1925 nip and 1868 Daat1 proteins, of which 1702 were shared proteins. By screening the proteins with the algorithm, both the isomerization levels and degrees of proteins were altered in daat1 compared with wild type.
HostingRepository	PRIDE
AnnounceDate	2026-02-20
AnnouncementXML	Submission_2026-02-20_00:28:22.819.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Gongyu Li
SpeciesList	scientific name: Oryza sativa (Rice); NCBI TaxID: NEWT:4530;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2025-01-12 20:26:28	ID requested
⏵ 1	2026-02-20 00:28:23	announced

Dataset with its publication pending

submitter keyword: rice

seed

LCMS

Gongyu Li
contact affiliation	Tianjin Key Laboratory of Biosensing and Molecular Recognition, Research Center for Analytical Science, Frontiers Science Center for New Organic Matter, College of Chemistry, Nankai University, Tianjin 300071, China
contact email	ligongyu@nankai.edu.cn
lab head
Gongyu Li
contact affiliation	Nankai University
contact email	ligongyu@nankai.edu.cn
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2026/02/PXD059692

PRIDE project URI

• PRIDE
  1. PXD059692
     1. Label: PRIDE project
     2. Name: Proteomics results of rice seeds