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PXD058849

PXD058849 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleDessauer_AKAP7_TripleTOF6600_P124
DescriptionThis dataset consists of 20 raw BioID MS and associated peak lists and results files, acquired on an ABSciex TripleTOF6600 operated in Data Dependent Acquisition mode. All control samples (untransfected and eGFP) are deposited with MSV000096100. Samples were generated by Taeyeop Park. Streptavidin affinity purification was performed by Zhen-Yuan Lin. Mass spectrometry acquisition was performed by Zhen-Yuan Lin and Cassandra Wong. Analysis was performed by Taeyeop Park, Cassandra Wong, Karen Colwill, and Carmen Dessauer. The files are associated with a manuscript submitted for publication by Taeyeop Park et al. The main goal of this dataset was to identify near neighbors of AKAP7-gamma in neonatal cardiomyocytes. Carmen W. Dessauer (Carmen.W.Dessauer@uth.tmc.edu) is the corresponding author of the proteomics data; John Scott is the corresponding author of the manuscript; Karen Colwill should be contacted for questions on this dataset (colwill@lunenfeld.ca) This submission is associated with 6 Supplementary Files (in addition to this README file) Table 1 BioID describes the composition of the BioID dataset Table 2 BioID lists all the peptide identification evidence of the BioID dataset Table 3 BioID lists the SAINTexpress interactions for BioID dataset
HostingRepositoryMassIVE
AnnounceDate2025-06-06
AnnouncementXMLSubmission_2025-06-06_06:44:33.900.xml
DigitalObjectIdentifier
ReviewLevelNon peer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportSupported dataset by repository
PrimarySubmitterKaren Colwill
SpeciesList scientific name: Rattus norvegicus; common name: Norway rat; NCBI TaxID: 10116;
ModificationListdeamidated L-asparagine; deamidated L-glutamine; L-methionine sulfoxide
InstrumentTripleTOF 6600
Dataset History
RevisionDatetimeStatusChangeLog Entry
02024-12-13 05:20:48ID requested
12025-06-06 06:44:34announced
Publication List
no publication
Keyword List
submitter keyword: BioID, proximal protein interactions, AKAP7, cardiomyocytes, DatasetType:Proteomics
Contact List
Karen Colwill
contact affiliationLTRI
contact emailcolwill@lunenfeld.ca
lab head
Karen Colwill
contact affiliationLunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital
contact emailcolwill@lunenfeld.ca
dataset submitter
Full Dataset Link List
MassIVE dataset URI
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v07/MSV000096656/