PXD058849
PXD058849 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Dessauer_AKAP7_TripleTOF6600_P124 |
| Description | This dataset consists of 20 raw BioID MS and associated peak lists and results files, acquired on an ABSciex TripleTOF6600 operated in Data Dependent Acquisition mode. All control samples (untransfected and eGFP) are deposited with MSV000096100. Samples were generated by Taeyeop Park. Streptavidin affinity purification was performed by Zhen-Yuan Lin. Mass spectrometry acquisition was performed by Zhen-Yuan Lin and Cassandra Wong. Analysis was performed by Taeyeop Park, Cassandra Wong, Karen Colwill, and Carmen Dessauer. The files are associated with a manuscript submitted for publication by Taeyeop Park et al. The main goal of this dataset was to identify near neighbors of AKAP7-gamma in neonatal cardiomyocytes. Carmen W. Dessauer (Carmen.W.Dessauer@uth.tmc.edu) is the corresponding author of the proteomics data; John Scott is the corresponding author of the manuscript; Karen Colwill should be contacted for questions on this dataset (colwill@lunenfeld.ca) This submission is associated with 6 Supplementary Files (in addition to this README file) Table 1 BioID describes the composition of the BioID dataset Table 2 BioID lists all the peptide identification evidence of the BioID dataset Table 3 BioID lists the SAINTexpress interactions for BioID dataset |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-06-06 |
| AnnouncementXML | Submission_2025-06-06_06:44:33.900.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Karen Colwill |
| SpeciesList | scientific name: Rattus norvegicus; common name: Norway rat; NCBI TaxID: 10116; |
| ModificationList | deamidated L-asparagine; deamidated L-glutamine; L-methionine sulfoxide |
| Instrument | TripleTOF 6600 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2024-12-13 05:20:48 | ID requested | |
| ⏵ 1 | 2025-06-06 06:44:34 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: BioID, proximal protein interactions, AKAP7, cardiomyocytes, DatasetType:Proteomics |
Contact List
| Karen Colwill | |
|---|---|
| contact affiliation | LTRI |
| contact email | colwill@lunenfeld.ca |
| lab head | |
| Karen Colwill | |
| contact affiliation | Lunenfeld-Tanenbaum Research Institute, Mount Sinai Hospital |
| contact email | colwill@lunenfeld.ca |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v07/MSV000096656/ |
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