PXD058109
PXD058109 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Iron-starvation induces photosystem I antenna remodeling in green algae |
| Description | Dunaliella salina and Dunaliella tertiolecta are extremophile, marine algae that can survive in very low Fe conditions. In this study, we used TMT-proteomics to compare the Fe starvation responses to the Fe replete responses. Samples were digested with trypsin, labeled with TMT 10-Plex, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-06-05 |
| AnnouncementXML | Submission_2025-06-05_15:04:37.882.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Dunaliella cf. bardawil CHPD1; NCBI TaxID: 1227098; scientific name: Dunaliella tertiolecta; NCBI TaxID: 3047; |
| ModificationList | Carbamidomethyl; Oxidation; TMT6plex |
| Instrument | Orbitrap Eclipse |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2024-11-20 19:33:00 | ID requested | |
| ⏵ 1 | 2025-06-05 15:04:38 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: algae, Chlorophyceae, iron homeostasis, metal deficiency, metal nutrition, photosynthesis, structural biology, DatasetType:Proteomics |
Contact List
| Sabeeha Merchant | |
|---|---|
| contact affiliation | California Institute for Quantitative Biosciences, University of California, Berkeley |
| contact email | sabeeha@berkeley.edu |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v07/MSV000096479/ |
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