PXD058104
PXD058104 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Chlamydomonas reinhardtii responses to Fe-excess, Fe-deficiency, and Fe-limitation in either photoautotrophic or mixotrophic growth |
| Description | A systems level analysis of Chlamydomonas reinhardtii grown photoautotrophically or mixotrophically with a reduced carbon source, acetate, under four different defined Fe stages of Fe-replete, Fe-deficient, Fe-limited, or Fe-excess. Samples were digested with trypsin, labeled with TMT 10-Plex, then analyzed by LC-MS/MS. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline. |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-06-05 |
| AnnouncementXML | Submission_2025-06-05_15:04:44.605.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Chlamydomonas reinhardtii; NCBI TaxID: 3055; |
| ModificationList | Oxidation; TMT6plex |
| Instrument | Q Exactive HF-X |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2024-11-20 14:21:43 | ID requested | |
| ⏵ 1 | 2025-06-05 15:04:45 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: algae, Chlorophyceae, iron homeostasis, metal deficiency, metal nutrition, photosynthesis, acetate, DatasetType:Proteomics |
Contact List
| Sabeeha Merchant | |
|---|---|
| contact affiliation | California Institute for Quantitative Biosciences, University of California, Berkeley |
| contact email | sabeeha@berkeley.edu |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v07/MSV000096475/ |
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