PXD057225

PXD057225 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Proteomics analysis of E. coli expressing BamA variants
Description	Here we present proteomics data for the analysis of E coli expressing BamA variants, with a LVPR insertion in the hinge region between the barrel and POTRA domains, or with the T434A mutation.
HostingRepository	PRIDE
AnnounceDate	2025-10-13
AnnouncementXML	Submission_2025-10-12_16:14:58.293.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Antonio Calabrese
SpeciesList	scientific name: Escherichia coli; NCBI TaxID: NEWT:562;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-10-27 03:50:46	ID requested
⏵ 1	2025-10-12 16:14:59	announced

Publication List

Csoma N, Machin JM, Whitehouse JM, Rodr, ì, guez-Alonso R, Olejnik M, Cahill AK, Cho SH, Sch, ä, berle TF, Iorga BI, Ranson NA, Radford SE, Calabrese AN, Collet JF, -barrel and POTRA domains of BamA are coupled for efficient function. Nat Commun, 16(1):8832(2025) [pubmed]
10.1038/s41467-025-63897-y;

Csoma N, Machin JM, Whitehouse JM, Rodr, ì, guez-Alonso R, Olejnik M, Cahill AK, Cho SH, Sch, ä, berle TF, Iorga BI, Ranson NA, Radford SE, Calabrese AN, Collet JF, -barrel and POTRA domains of BamA are coupled for efficient function. Nat Commun, 16(1):8832(2025) [pubmed]

10.1038/s41467-025-63897-y;

Keyword List

submitter keyword: BAM, proteomics,E coli

submitter keyword: BAM, proteomics,E coli

Contact List

Antonio Calabrese
contact affiliation	Astbury Centre for Structural Molecular Biology, Faculty of Biological Sciences, University of Leeds, Leeds, LS2 9JT, United Kingdom
contact email	a.calabrese@leeds.ac.uk
lab head
Antonio Calabrese
contact affiliation	School of Molecular and Cellular Biology, University of Leeds
contact email	a.calabrese@leeds.ac.uk
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD057225
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/10/PXD057225

PRIDE project URI

Repository Record List

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