PXD057220

PXD057220 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Metaproteomic profiling of a granule-forming Ca. Accumulibacter enrichment
Description	Extracellular proteins play key roles in microbial biofilm and aggregate formation, yet remain poorly understood. Using two advanced metaproteomic techniques, this study identified and classified 387 extracellular proteins potentially involved in aggregate formation, including filamentous and cell surface proteins from various organisms. The findings suggest that diverse proteins from multiple organisms support the granular biofilm formation in the investigated Ca. Accumulibacter enrichment, providing a valuable resource for studying the scope of extracellular proteins.
HostingRepository	PRIDE
AnnounceDate	2025-02-21
AnnouncementXML	Submission_2025-02-21_06:07:29.289.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Martin Pabst
SpeciesList	scientific name: Candidatus Accumulibacter phosphatis; NCBI TaxID: 327160;
ModificationList	acetylated residue; monohydroxylated residue; deamidated residue; iodoacetamide derivatized residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-10-26 14:13:00	ID requested
⏵ 1	2025-02-21 06:07:29	announced

Publication List

10.1002/PMIC.202400189;

10.1002/PMIC.202400189;

Keyword List

submitter keyword: shotgun proteomics,Ca. Accumulibacter phosphatis, granular biofilm, secretome

submitter keyword: shotgun proteomics,Ca. Accumulibacter phosphatis, granular biofilm, secretome

Contact List

Martin Pabst
contact affiliation	Department of Biotechnology, Delft University of Technology, The Netherlands.
contact email	m.pabst@tudelft.nl
lab head
Martin Pabst
contact affiliation	TUD
contact email	m.pabst@tudelft.nl
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/02/PXD057220
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/02/PXD057220

PRIDE project URI

Repository Record List

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