PXD056675

PXD056675 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Deciphering the role of selective modification of N-glycosylation in melanocyte development and melanoma progression
Description	To explore the qualitative changes in the glycoproteome in B16 mouse melanoma cells upon ablation of Mgat4b gene which encodes for an enzyme responsible for the modification of N-glycosylation pattern in specific proteins, we performed LC-MS/MS of the lysate enriched by Datura Stramonium lectin from wildtype B16 cell and Mgat4b-/- cells.
HostingRepository	PRIDE
AnnounceDate	2025-05-14
AnnouncementXML	Submission_2025-05-14_04:29:54.936.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Vivek T Natarajan
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Exploris 240

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-10-09 22:04:54	ID requested
⏵ 1	2025-05-14 04:29:55	announced

Publication List

10.1101/2024.10.10.617552;

10.1101/2024.10.10.617552;

Keyword List

submitter keyword: nano-LC-MS,Mouse, N-glycosylation, melanoma

submitter keyword: nano-LC-MS,Mouse, N-glycosylation, melanoma

Contact List

Dr.Vivek T Natarajan
contact affiliation	CSIR-Institute of Genomics and Integrative Biology, Mathura Road, New Delhi 110025, India Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh 201002, India
contact email	tnvivek@igib.in
lab head
Vivek T Natarajan
contact affiliation	CSIR-Institute of Genomics and Integrative Biology
contact email	tnvlab.igib@gmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD056675
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD056675

PRIDE project URI

Repository Record List

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