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PXD056609

PXD056609 is an original dataset announced via ProteomeXchange.

Dataset Summary
TitleMSI-VISUAL: New visualization methods for Mass Spectrometry Imaging and tools for interactive mapping and exploration of m/z values
DescriptionMass spectrometry imaging dataset from fresh frozen mouse brain sections for development of a novel spatial segmentation computational pipeline.
HostingRepositoryPRIDE
AnnounceDate2025-03-14
AnnouncementXMLSubmission_2025-03-13_22:02:19.618.xml
DigitalObjectIdentifier
ReviewLevelPeer-reviewed dataset
DatasetOriginOriginal dataset
RepositorySupportUnsupported dataset by repository
PrimarySubmitterJens Pahnke
SpeciesList scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationListNo PTMs are included in the dataset
InstrumenttimsTOF fleX
Dataset History
RevisionDatetimeStatusChangeLog Entry
02024-10-08 05:12:44ID requested
12025-03-13 22:02:20announced
Publication List
10.1101/2025.03.09.642213;
Keyword List
submitter keyword: clustering,mass spectrometry imaging, amyloid-beta, Kmeans, saliency optimization, Alzheimer, brain, non-negative matrix factorization, segmentation, percentile ratio, UMAP
Contact List
Jens Pahnke
contact affiliationUniversity of Oslo, www.pahnkelab.eu
contact emailjens.pahnke@gmail.com
lab head
Jens Pahnke
contact affiliationUniversity of Oslo, University of Lübeck, University of Latvia, Tel Aviv University, www.pahnkelab.eu
contact emailjens.pahnke@gmail.com
dataset submitter
Full Dataset Link List
Dataset FTP location
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PRIDE project URI
Repository Record List
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