PXD056444

PXD056444 is an original dataset announced via ProteomeXchange.

Title	Impact of mutations in the HEADING DATE 1 gene on transcription and cell wall composition of rice_P2777
Description	HEADING DATE 1 (Hd1) is a zinc finger transcription factor, central in the photoperiodic flowering network. Hd1 operates as a repressor of flowering under long days but reverts to a promoter of flowering under short days. How this dual function is organized at the proteomic level is still unknown. Here, we have used MS to interrogate the proteome of hd1 mutants and wild type plants under long and short day conditions, and we identified differential abundance of proteins involved in cell wall metabolism.
HostingRepository	PRIDE
AnnounceDate	2025-04-10
AnnouncementXML	Submission_2025-04-10_07:12:36.509.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Frank Stein
SpeciesList	scientific name: Oryza sativa (Rice); NCBI TaxID: 4530;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion Lumos

Revision	Datetime	Status	ChangeLog Entry
0	2024-10-02 04:30:19	ID requested
⏵ 1	2025-04-10 07:12:37	announced

10.1093/plphys/kiaf120;

Biancucci M, Chiriv, ì D, Baldini A, Badenhorst E, Dobetti F, Khahani B, Formentin E, Eguen T, Turck F, Moore JP, Tavakol E, Wenkel S, Lo Schiavo F, Ezquer I, Brambilla V, Horner D, Chiara M, Perrella G, Betti C, Fornara F, Mutations in HEADING DATE 1 affect transcription and cell wall composition in rice. Plant Physiol, 197(4):(2025) [pubmed]

submitter keyword: hd1-1 versus wild type leaf proteome

Camilla Betti
contact affiliation	Department of Biosciences, University of Milan, Via Celoria 26, 20133, Milan (Italy)
contact email	camilla.betti@unimi.it
lab head
Frank Stein
contact affiliation	EMBL
contact email	frank.stein@embl.de
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD056444

PRIDE project URI

• PRIDE
  1. PXD056444
     1. Label: PRIDE project
     2. Name: Impact of mutations in the HEADING DATE 1 gene on transcription and cell wall composition of rice_P2777