PXD056299

PXD056299 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Development of a proximity labeling vector to identify protein-protein interactions in human stem cells
Description	Development a novel system employing TurboID-fusion proteins within an integrative and inducible expression vector to investigate the interactome during stem cell differentiation. Cells expressing U2AF2 (iU2) or GFP (iGFP) fused with TurboID in undifferentiated (D0) or mesoderm differentiated (D1) were analyzed to identified the interactome and detect changes under differentiation process.
HostingRepository	PRIDE
AnnounceDate	2025-01-07
AnnouncementXML	Submission_2025-01-07_03:40:23.046.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Rubens Gomes Junior
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	acetylated residue; monohydroxylated residue
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-09-26 14:47:25	ID requested
⏵ 1	2025-01-07 03:40:23	announced

Publication List

Dataset with its publication pending

Dataset with its publication pending

Keyword List

submitter keyword: Proximity labeling, hiPSC,TurboID, LC-MS/MS

submitter keyword: Proximity labeling, hiPSC,TurboID, LC-MS/MS

Contact List

Bruno Dallagiovanna
contact affiliation	Carlos Chagas Institute - Stem cell basic biology lab
contact email	bruno.dallagiovanna@fiocruz.br
lab head
Rubens Gomes Junior
contact affiliation	Oswaldo Cruz Foundation - Carlos Chagas Institute
contact email	rubens_gjr@hotmail.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD056299
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD056299

PRIDE project URI

Repository Record List

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