PXD055862

PXD055862 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	LC-MS analysis of the HLA peptides of pancreatic beta cells
Description	Study of several preparations of immunopeptides from stem cell derived pancreatic beta cells
HostingRepository	PRIDE
AnnounceDate	2025-12-01
AnnouncementXML	Submission_2025-11-30_16:19:07.855.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Tim Fugmann
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: NEWT:9606;
ModificationList	monohydroxylated residue
Instrument	Q Exactive HF

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-09-14 02:56:12	ID requested
⏵ 1	2025-11-30 16:19:08	announced

Publication List

Walters K, Castro-Gutierrez R, Sarkar S, Baldwin A, Baker AS, Shilleh AH, Anderson AM, Nakayama M, Fugman T, Nakayasu ES, Mukherjee N, Russ HA, -Cells. Diabetes, 74(12):2322-2336(2025) [pubmed]
10.2337/db24-0527;

Walters K, Castro-Gutierrez R, Sarkar S, Baldwin A, Baker AS, Shilleh AH, Anderson AM, Nakayama M, Fugman T, Nakayasu ES, Mukherjee N, Russ HA, -Cells. Diabetes, 74(12):2322-2336(2025) [pubmed]

10.2337/db24-0527;

Keyword List

ProteomeXchange project tag: Human Immuno-Peptidome Project (HUPO-HIPP) (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project
submitter keyword: HLA, HIPP, T1D,immunopeptidomics

ProteomeXchange project tag: Human Immuno-Peptidome Project (HUPO-HIPP) (B/D-HPP), Biology/Disease-Driven Human Proteome Project (B/D-HPP), Human Proteome Project

submitter keyword: HLA, HIPP, T1D,immunopeptidomics

Contact List

Tim Fugmann
contact affiliation	Alitea Biotechnology GmbH
contact email	tim.fugmann@alithea-bio.com
lab head
Tim Fugmann
contact affiliation	Alithea Biotechnology GmbH
contact email	tim.fugmann@alithea-bio.com
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/12/PXD055862
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/12/PXD055862

PRIDE project URI

Repository Record List

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