PXD055575 is an
original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Analysis of type IV collagen alpha chain ratios in Caenorhabditis elegans |
| Description | CRISPR / Cas-9 mediated homologous recombination was used to fuse type IV collagen alpha chains (EMB-9 and LET-2) with the fluorescent proteins mNeonGreen and mRuby2 in Caenorhabditis elegans. L1 to L3 larvae were collected and processed for mass spectrometry. The goal of this study was to compare the abundance of each chain. The Caenorhabditis elegans strains used in this study were NK3077(qy228 [let-2::mNG] X ; qy244 [emb-9::mRuby2] III) and NK3083 (qy216 [let-2::mRuby2] X ; qy236 [emb-9::mNG] III). |
| HostingRepository | PRIDE |
| AnnounceDate | 2026-02-02 |
| AnnouncementXML | Submission_2026-02-02_06:26:33.637.xml |
| DigitalObjectIdentifier | https://dx.doi.org/10.6019/PXD055575 |
| ReviewLevel | Peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Mychel Morais |
| SpeciesList | scientific name: Caenorhabditis elegans; NCBI TaxID: NEWT:6239; |
| ModificationList | iodoacetamide derivatized residue |
| Instrument | Orbitrap Exploris 480 |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|
| 0 | 2024-09-05 01:26:56 | ID requested | |
| ⏵ 1 | 2026-02-02 06:26:34 | announced | |
Publication List
Keyword List
| submitter keyword: Type IV Collagen, Basement Membrane, LET-2, EMB-9, Caenorhabditis elegans |
Contact List
| Rachel Lennon |
|---|
| contact affiliation | Wellcome Centre for Cell-Matrix Research. The University of Manchester, UK. |
| contact email | rachel.lennon@manchester.ac.uk |
| lab head | |
| Mychel Morais |
|---|
| contact affiliation | The University of Manchester |
| contact email | mychel.morais@manchester.ac.uk |
| dataset submitter | |
Full Dataset Link List
Dataset FTP location
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| PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD055575
- Label: PRIDE project
- Name: Analysis of type IV collagen alpha chain ratios in Caenorhabditis elegans
