PXD055235 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Identification the proteins interacted with ILF2 in human keratinocytes |
Description | By profiling lncRNA expression changes during human skin wound healing and screening lncRNA functions, we identified SNHG26 as a pivotal regulator in keratinocyte progenitors underpinning this phase transition. we performed RNA pull-down assay in human keratinocyte progenitors and found SNHG26 interact with ILF2. ILF2, or the nuclear condensates it forms, is crucial for maintaining the stability of SNHG26. To identify other protein components within these condensates, we employed a proximity-dependent biotin identification (BioID) assay, which label proteins in close proximity to ILF2 that fused to BioID2, and subsequently identifying them through mass spectrometry (MS). |
HostingRepository | PRIDE |
AnnounceDate | 2024-08-28 |
AnnouncementXML | Submission_2024-08-28_00:24:58.606.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Lihua Luo |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | timsTOF Pro 2 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-08-27 05:43:41 | ID requested | |
⏵ 1 | 2024-08-28 00:24:58 | announced | |
Publication List
Dataset with its publication pending |
Keyword List
submitter keyword: Keratinocyte,ILF2 |
Contact List
Dongqing Li |
contact affiliation | Institute of Dermatology, Chinese Academy of Medical Sciences and Peking Union Medical College, 210042 Nanjing, China. |
contact email | dongqing.li@pumcderm.cams.cn |
lab head | |
Lihua Luo |
contact affiliation | Karolinska Institutet |
contact email | lihua.luo@ki.se |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
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PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD055235
- Label: PRIDE project
- Name: Identification the proteins interacted with ILF2 in human keratinocytes