PXD055224

PXD055224 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	Development of LC-FAIMS-MS and its application to lipidomics study of Acinetobacter baumannii infection
Description	Here we present the development and application of LC-FAIMS-MS/MS based platform for untargeted lipidomics. The combination of normal phase liquid chromatography (NPLC), which can separate different types of phospholipids based on their head groups, and high-resolution MS (HRMS) offers a powerful qualitative and quantitative workflow for serum lipid profiling.We exploited this NPLC-FAIMS-HRMS to analyze the serum lipid profiles in mice infected intranasally with Acinetobacter baumannii, and developed an MS/MS matching tool to identify the detected lipids.
HostingRepository	PRIDE
AnnounceDate	2025-05-07
AnnouncementXML	Submission_2025-05-07_02:02:43.694.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Jianjun Li
SpeciesList	scientific name: Mus musculus (Mouse); NCBI TaxID: 10090;
ModificationList	No PTMs are included in the dataset
Instrument	LTQ Orbitrap

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-08-27 02:26:11	ID requested
⏵ 1	2025-05-07 02:02:44	announced

Publication List

10.1016/j.jlr.2024.100668;
Li J, Stupak J, Haqqani AS, Harris G, Zhou H, Williamson S, Chen R, Xu HH, Chen W, Development of LC-FAIMS-MS and its application to lipidomics study of Acinetobacter baumannii infection. J Lipid Res, 65(11):100668(2024) [pubmed]

10.1016/j.jlr.2024.100668;

Li J, Stupak J, Haqqani AS, Harris G, Zhou H, Williamson S, Chen R, Xu HH, Chen W, Development of LC-FAIMS-MS and its application to lipidomics study of Acinetobacter baumannii infection. J Lipid Res, 65(11):100668(2024) [pubmed]

Keyword List

submitter keyword: FAIMS,LC-MS, Acinetobacter baumannii, Serum, Lipidomics

submitter keyword: FAIMS,LC-MS, Acinetobacter baumannii, Serum, Lipidomics

Contact List

Jianjun Li
contact affiliation	National Research Council Canada
contact email	jianjun.li@nrc-cnrc.gc.ca
lab head
Jianjun Li
contact affiliation	National Research Council Canada
contact email	jianjun.li@nrc-cnrc.gc.ca
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD055224
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/05/PXD055224

PRIDE project URI

Repository Record List

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