PXD055059 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | Vibrio cholerae (p)ppGpp and DksA mutants SWATH |
Description | This study elucidates the whole proteome changes in the wild type and gnetically modified strains of Vibrio cholerae. Label-free SWATH-MS is used for protein quantitation following genetic modifications in alarmone (p)ppGpp metabolizing genes and transcription factor DksA. |
HostingRepository | PRIDE |
AnnounceDate | 2025-01-29 |
AnnouncementXML | Submission_2025-01-29_04:17:41.095.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Prabhakar Babele |
SpeciesList | scientific name: Vibrio cholerae O1 str. Haiti; NCBI TaxID: 1288389; |
ModificationList | No PTMs are included in the dataset |
Instrument | TripleTOF 5600 |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-08-22 06:10:02 | ID requested | |
⏵ 1 | 2025-01-29 04:17:41 | announced | |
Publication List
Keyword List
submitter keyword: LC-MSMS,Vibrio cholerae, DksA, SWATH-MS, (p)ppGpp |
Contact List
Bhabatosh Das |
contact affiliation | Functional Genomics Laboratory, Translational Health Science and Technology Institute, India |
contact email | bhabatosh@thsti.res.in |
lab head | |
Prabhakar Babele |
contact affiliation | Translational Health Science and Technology Institute |
contact email | prabhakarbabele@gmail.com |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD055059 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD055059
- Label: PRIDE project
- Name: Vibrio cholerae (p)ppGpp and DksA mutants SWATH