PXD055059

PXD055059 is an original dataset announced via ProteomeXchange.

Title	Vibrio cholerae (p)ppGpp and DksA mutants SWATH
Description	This study elucidates the whole proteome changes in the wild type and gnetically modified strains of Vibrio cholerae. Label-free SWATH-MS is used for protein quantitation following genetic modifications in alarmone (p)ppGpp metabolizing genes and transcription factor DksA.
HostingRepository	PRIDE
AnnounceDate	2025-01-29
AnnouncementXML	Submission_2025-01-29_04:17:41.095.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Prabhakar Babele
SpeciesList	scientific name: Vibrio cholerae O1 str. Haiti; NCBI TaxID: 1288389;
ModificationList	No PTMs are included in the dataset
Instrument	TripleTOF 5600

Revision	Datetime	Status	ChangeLog Entry
0	2024-08-22 06:10:02	ID requested
⏵ 1	2025-01-29 04:17:41	announced

10.1128/SPECTRUM.01169-24;

submitter keyword: LC-MSMS,Vibrio cholerae, DksA, SWATH-MS, (p)ppGpp

Bhabatosh Das
contact affiliation	Functional Genomics Laboratory, Translational Health Science and Technology Institute, India
contact email	bhabatosh@thsti.res.in
lab head
Prabhakar Babele
contact affiliation	Translational Health Science and Technology Institute
contact email	prabhakarbabele@gmail.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/01/PXD055059

PRIDE project URI

• PRIDE
  1. PXD055059
     1. Label: PRIDE project
     2. Name: Vibrio cholerae (p)ppGpp and DksA mutants SWATH