PXD055040

PXD055040 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	LncRNA LINC00622 directly bingding proteins in melanoma cells
Description	We conducted an RNA pulldown assay in melanoma cell line SK-MEL-28 using in vitro-transcribed full-length LINC00622 RNA accompanied with a control EGFP RNA. The specific binding proteins of LINC00622 was identified using high-performance liquid chromatography-mass spectrometry (HPLC-MS).
HostingRepository	PRIDE
AnnounceDate	2025-07-21
AnnouncementXML	Submission_2025-07-20_16:04:02.944.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	can li
SpeciesList	scientific name: Homo sapiens (Human); NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Fusion

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-08-22 06:04:32	ID requested
⏵ 1	2025-07-20 16:04:03	announced

Publication List

Li C, Wang K, Zhao L, Liu J, Jin Y, Zhang C, Xu M, Wang M, Kuang Y, Liu J, Zhou L, Wen Q, LINC00622 transcriptionally promotes RRAGD to repress mTORC1-modulated autophagic cell death by associating with BTF3 in cutaneous melanoma. Cell Death Dis, 16(1):515(2025) [pubmed]
10.1038/s41419-025-07828-1;

Li C, Wang K, Zhao L, Liu J, Jin Y, Zhang C, Xu M, Wang M, Kuang Y, Liu J, Zhou L, Wen Q, LINC00622 transcriptionally promotes RRAGD to repress mTORC1-modulated autophagic cell death by associating with BTF3 in cutaneous melanoma. Cell Death Dis, 16(1):515(2025) [pubmed]

10.1038/s41419-025-07828-1;

Keyword List

submitter keyword: HPLC-MS,LINC00622,melanoma,human

submitter keyword: HPLC-MS,LINC00622,melanoma,human

Contact List

can Li
contact affiliation	Southern Medical University, Guangzhou, China
contact email	lican1999@smu.edu.cn
lab head
can li
contact affiliation	Southern Medical University
contact email	lican1999@smu.edu.cn
dataset submitter

Full Dataset Link List

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/07/PXD055040
PRIDE project URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/07/PXD055040

PRIDE project URI

Repository Record List

[ + ]