PXD054947
PXD054947 is an original dataset announced via ProteomeXchange.
Dataset Summary
| Title | Systems analysis of photoprotection across the diurnal cycle in Chlamydomonas reinhardtii |
| Description | A comprehensive understanding of diurnal regulatory circuits of synchronized, photoautotrophic Chlamydomonas populations interfacing with light levels varying from low light (50 umol photons m-2 s-1), medium light (200 umol photons m-2 s-1), and high light (1000 umol photons m-2 s-1) in 12 h light/12 h dark cycles was gained through transcriptomic and proteomic data, revealing a rhythmic gene expression program acclimated to low and high diurnal light via photosystem abundance, thylakoid architecture, and non-photochemical quenching that persist through the night, suggesting anticipation of the daylight environment. |
| HostingRepository | MassIVE |
| AnnounceDate | 2025-04-10 |
| AnnouncementXML | Submission_2025-04-10_11:06:55.158.xml |
| DigitalObjectIdentifier | |
| ReviewLevel | Non peer-reviewed dataset |
| DatasetOrigin | Original dataset |
| RepositorySupport | Supported dataset by repository |
| PrimarySubmitter | Matthew Monroe |
| SpeciesList | scientific name: Chlamydomonas reinhardtii; NCBI TaxID: 3055; |
| ModificationList | Oxidation; TMTpro |
| Instrument | Q Exactive HF-X |
Dataset History
| Revision | Datetime | Status | ChangeLog Entry |
|---|---|---|---|
| 0 | 2024-08-15 21:49:17 | ID requested | |
| ⏵ 1 | 2025-04-10 11:06:55 | announced |
Publication List
| no publication |
Keyword List
| submitter keyword: chloroplast, RNAseq, lipidomics, pigments, antenna, NPQ, super-resolution microscopy, diel, alga, chlorophyte |
Contact List
| Sabeeha Merchant | |
|---|---|
| contact affiliation | University of California Berkeley |
| contact email | sabeeha@berkeley.edu |
| lab head | |
| Matthew Monroe | |
| contact affiliation | Pacific Northwest National Laboratory |
| contact email | matthew.monroe@pnnl.gov |
| dataset submitter | |
Full Dataset Link List
| MassIVE dataset URI |
| Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive-ftp.ucsd.edu/v08/MSV000095622/ |
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