PXD054080

PXD054080 is an original dataset announced via ProteomeXchange.

Dataset Summary

Title	DNA O-MAP uncovers the molecular neighborhoods associated with specific genomic loci
Description	Here, we introduce a method termed DNA O-MAP, which uses programmable peroxidase-conjugated oligonucleotide probes to biotinylate nearby proteins. We show that DNA O-MAP can be coupled with sample multiplexed quantitative proteomics and next-generation sequencing to quantify DNA-protein and DNA-DNA interactions at specific genomic loci.
HostingRepository	MassIVE
AnnounceDate	2024-11-22
AnnouncementXML	Submission_2024-11-22_14:05:13.127.xml
DigitalObjectIdentifier
ReviewLevel	Non peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Chris McGann
SpeciesList	scientific name: Homo sapiens; common name: human; NCBI TaxID: 9606;
ModificationList	No PTMs are included in the dataset
Instrument	Orbitrap Eclipse

Dataset History

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-20 14:19:12	ID requested
⏵ 1	2024-11-22 14:05:13	announced

Publication List

no publication

no publication

Keyword List

submitter keyword: Proteomics, OMAP

submitter keyword: Proteomics, OMAP

Contact List

Devin Schweppe
contact affiliation	University of Washington
contact email	dkschwep@uw.edu
lab head
Chris McGann
contact affiliation	University of Washington
contact email	cmcgann@uw.edu
dataset submitter

Full Dataset Link List

MassIVE dataset URI
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MassIVE dataset URI

Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://massive.ucsd.edu/v08/MSV000095396/