PXD053977

PXD053977 is an original dataset announced via ProteomeXchange.

Title	Cultivated Genome References for protein database construction and high-resolution taxonomic annotation in metaproteomics
Description	We constructed a protein database (DBCGR2) for gut microbiome metaproteomics, which was based on a database of cultivated genomes (Cultivated Genome Reference 2 - CGR2).
HostingRepository	PRIDE
AnnounceDate	2024-12-06
AnnouncementXML	Submission_2024-12-06_01:53:20.340.xml
DigitalObjectIdentifier
ReviewLevel	Peer-reviewed dataset
DatasetOrigin	Original dataset
RepositorySupport	Unsupported dataset by repository
PrimarySubmitter	Xiaowei Gao
SpeciesList	scientific name: gut metagenome; NCBI TaxID: 749906;
ModificationList	monohydroxylated residue; iodoacetamide derivatized residue
Instrument	Orbitrap Fusion

Revision	Datetime	Status	ChangeLog Entry
0	2024-07-16 03:50:22	ID requested
⏵ 1	2024-12-06 01:53:20	announced

10.1128/SPECTRUM.01755-24;

submitter keyword: Database

Xiaowei Gao
contact affiliation	BGI institute
contact email	x.gao2021@outlook.com
lab head
Xiaowei Gao
contact affiliation	BGI
contact email	lxqshss@163.com
dataset submitter

Dataset FTP location NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2024/12/PXD053977

PRIDE project URI

• PRIDE
  1. PXD053977
     1. Label: PRIDE project
     2. Name: Cultivated Genome References for protein database construction and high-resolution taxonomic annotation in metaproteomics