PXD053911 is an
original dataset announced via ProteomeXchange.
Dataset Summary
Title | CellEKT: A chemical proteomics assay to profile cellular target engagement of kinase inhibitors |
Description | Activity-based protein profiling is a powerful tool to study target engagement in complex biological environments. XO44, ALX005 and ALX011 are chemical probes based on the scaffold of a promiscuous kinase binder, which covalently reacts with a conserved lysine in the ATP-binding pocket of kinases. Pretreatment of cells with a drug (candidate) results in competition of XO44/ALX005/ALX011 binding, which can be interpreted as in situ target engagement. Here CellEKT is presented, a workflow which is optimized for kinome coverage, reproducibility and data processing. This dataset pertains to the selectivity testing of Dasatinib in MV4-11 cells using a probe cocktail of XO44, ALX005 and ALX011. |
HostingRepository | PRIDE |
AnnounceDate | 2025-04-08 |
AnnouncementXML | Submission_2025-04-08_07:14:52.860.xml |
DigitalObjectIdentifier | |
ReviewLevel | Peer-reviewed dataset |
DatasetOrigin | Original dataset |
RepositorySupport | Unsupported dataset by repository |
PrimarySubmitter | Joel Rüegger |
SpeciesList | scientific name: Homo sapiens (Human); NCBI TaxID: 9606; |
ModificationList | iodoacetamide derivatized residue |
Instrument | Q Exactive HF |
Dataset History
Revision | Datetime | Status | ChangeLog Entry |
0 | 2024-07-12 04:03:37 | ID requested | |
⏵ 1 | 2025-04-08 07:14:53 | announced | |
Publication List
Keyword List
submitter keyword: ABPP, drug discovery, ALX005,CellEKT, chemical proteomics, ALX011, kinase, XO44 |
Contact List
Mario van der Stelt |
contact affiliation | Professor of Molecular Physiology, Leiden Institute of Chemistry, Leiden University, The Netherlands |
contact email | m.van.der.stelt@chem.leidenuniv.nl |
lab head | |
Joel Rüegger |
contact affiliation | Leiden University |
contact email | j.ruegger@lic.leidenuniv.nl |
dataset submitter | |
Full Dataset Link List
Dataset FTP location
NOTE: Most web browsers have now discontinued native support for FTP access within the browser window. But you can usually install another FTP app (we recommend FileZilla) and configure your browser to launch the external application when you click on this FTP link. Or otherwise, launch an app that supports FTP (like FileZilla) and use this address: ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2025/04/PXD053911 |
PRIDE project URI |
Repository Record List
[ + ]
[ - ]
- PRIDE
- PXD053911
- Label: PRIDE project
- Name: CellEKT: A chemical proteomics assay to profile cellular target engagement of kinase inhibitors